PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011092176.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family GeBP
Protein Properties Length: 397aa    MW: 43473.2 Da    PI: 4.9788
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011092176.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573111.74.7e-3598201198
          DUF573   1 klfqrlwseeDeivlLqGlidfkaktgk......spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkif 89 
                     klfqrlw++eDei lLqG++d+++++        + ++d++afy+++k++ +++++k+qlveK+rrLKkK+++  +k  sgk+ +f+++hdq +f
  XP_011092176.1  98 KLFQRLWTDEDEIELLQGFLDYTTQRCGphnssqQHHHDTTAFYDQIKSKFQLDFNKNQLVEKLRRLKKKYRNVINKFGSGKDYTFKSPHDQATF 192
                     579*******************9987544654545566********************************************************* PP

          DUF573  90 elskkiWgs 98 
                     e+s+kiWgs
  XP_011092176.1 193 EISSKIWGS 201
                     *******95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.5E-33100200IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MASAGDPSAA AAAAGNIFNE DEDLLEDDDD DESSDHDEDD SASSAALAVD RPPPSTSAAQ  60
VTIAVPGIPD PLLITKQQQQ QETMITKKPA ALPDESRKLF QRLWTDEDEI ELLQGFLDYT  120
TQRCGPHNSS QQHHHDTTAF YDQIKSKFQL DFNKNQLVEK LRRLKKKYRN VINKFGSGKD  180
YTFKSPHDQA TFEISSKIWG SAAVNGSSAF RAAPAAIEED DDDLNTPNFA DCQSPNPNGI  240
DVNSKTPRPR KRNRAGVVKL EDKPHHAPVN SNINNNQSPA VVTPMAAPVV GAGITGSLST  300
VIEETVKSCL SPIFKELLSN SLNSNLNPSG PCCGHGFGLA RSPIPLCFAG ATVGGDRQTN  360
DRWRKQQILE LEVFSKRLEL VQDQIREQLQ ELRSMGN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092176.10.0PREDICTED: uncharacterized protein LOC105172444
RefseqXP_011092175.10.0PREDICTED: uncharacterized protein LOC105172444
TrEMBLA0A022RBH21e-174A0A022RBH2_ERYGU; Uncharacterized protein
STRINGPGSC0003DMT4000092061e-107(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.12e-77DNA-binding storekeeper protein-related transcriptional regulator